VIRsiRNAdb

../../tmp/servers/virsirnadb/1199465793
Result for your query siRNA sequence

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Strain name	Start	Alignment	End	% Identity
Query	virsi1245	1	`cggcatacagcttcaactg`	19
AY688948.1	West Nile virus strain Sarafend, complete genome	956	`.a.................`	974	94
AY688948.1	West Nile virus strain Sarafend, complete genome	10895	`__..t..........g.._`	10880	73
AY532665.1	West Nile virus strain B956 polyprotein gene, complete genome	956	`.a.................`	974	94
AY532665.1	West Nile virus strain B956 polyprotein gene, complete genome	10877	`_...t..........g.__`	10862	73
DQ318019.1	West Nile virus strain ArD76104, complete genome	956	`.a.................`	974	94
DQ318019.1	West Nile virus strain ArD76104, complete genome	10877	`_...t..........g.__`	10862	73
DQ318020.1	Wets NIle virus strain ArB3573/82, complete genome	956	`.a.................`	974	94
DQ318020.1	Wets NIle virus strain ArB3573/82, complete genome	10887	`_...t..........g.__`	10872	73
DQ786572.1	West Nile virus isolate France 405/04 polyprotein gene, complete cds	932	`.a.................`	950	94
DQ786573.1	West Nile virus isolate France 407/04 polyprotein gene, complete cds	932	`.a.................`	950	94
EF429197.1	West Nile virus SPU116/89, complete genome	956	`.a.................`	974	94
EF429197.1	West Nile virus SPU116/89, complete genome	10889	`_...t..........g.__`	10874	73
EF429199.1	West Nile virus SA381/00, complete genome	956	`.a.................`	974	94
EF429200.1	West Nile virus H442, complete genome	956	`.a.................`	974	94
EF429200.1	West Nile virus H442, complete genome	10888	`_...t..........g.__`	10873	73
EU068667.1	West Nile virus isolate SPU116-89 polyprotein gene, complete cds	860	`.a.................`	878	94
HM147824.1	West Nile virus from Democratic Republic of the Congo, complete genom	956	`.a.................`	974	94
HM147824.1	West Nile virus from Democratic Republic of the Congo, complete genom	10889	`_...t..........g.__`	10874	73
M12294.2	WNFCG West Nile virus RNA, complete genome	956	`.a.................`	974	94
M12294.2	WNFCG West Nile virus RNA, complete genome	10801	`_...t..........g.__`	10786	73
AF202541.1	West Nile virus strain HNY1999 polyprotein (C, prM, E, NS1, NS2a, NS2	914	`.a..t..............`	932	89
AF206518.2	West Nile virus isolate 2741, complete genome	938	`.a..t..............`	956	89
AF260967.1	West Nile virus strain NY99-eqhs, complete genome	956	`.a..t..............`	974	89
AF260969.1	West Nile virus strain RO97-50, complete genome	956	`.a..c..............`	974	89
AF196835.2	West Nile virus strain NY99-flamingo382-99, complete genome	956	`.a..t..............`	974	89
AF317203.1	West Nile virus VLG-4 polyprotein precursor, gene, complete cds	924	`.a..c..............`	942	89
AF404753.1	West Nile virus isolate WN MD 2000-crow265, complete genome	956	`.a..t..............`	974	89
AF404754.1	West Nile virus isolate WN NJ 2000 MQ5488, complete genome	956	`.a..t..............`	974	89
AF404755.1	West Nile virus isolate WN NY 2000-grouse3282, complete genome	956	`.a..t..............`	974	89
AF404756.1	West Nile virus isolate WN NY 2000-crow3356, complete genome	956	`.a..t..............`	974	89
AF404757.1	West Nile virus isolate WN Italy 1998-equine, complete genome	956	`.a..c..............`	974	89
AF533540.1	West Nile virus polyprotein precursor, gene, complete cds	956	`.a..t..............`	974	89
AY262283.1	West Nile virus isolate KN3829 polyprotein gene, complete cds	920	`.a..c..............`	938	89
AY277252.1	West Nile virus isolate LEIV-Vlg99-27889, complete genome	956	`.a..c..............`	974	89
AY278442.1	West Nile virus isolate LEIV-Vlg00-27924, complete genome	956	`.a..c..............`	974	89
AY268132.1	West Nile virus strain PaAn001 polyprotein (pol) gene, complete cds	936	`.a..c..............`	954	89
AB185916.1	West Nile virus gene for polyprotein precursor protein, complete cds,	956	`.a..t..............`	974	89
AB185917.1	West Nile virus gene for polyprotein precursor protein, complete cds,	956	`.a..t..............`	974	89
AB185914.2	West Nile virus gene for polyprotein precursor protein, complete cds,	956	`.a..t..............`	974	89
AB185915.2	West Nile virus gene for polyprotein precursor protein, complete cds,	956	`.a..t..............`	974	89
AY701412.1	West Nile virus strain 96-111 polyprotein gene, complete cds	914	`.a..c..............`	932	89
AY701413.1	West Nile virus strain 04.05 polyprotein gene, complete cds	914	`.a..c..............`	932	89
AY712945.1	West Nile virus isolate Bird 1153, complete genome	956	`.a..t..............`	974	89
AY712946.1	West Nile virus isolate Bird 1171, complete genome	956	`.a..t..............`	974	89
AY712947.1	West Nile virus isolate Bird 1461, complete genome	956	`.a..t..............`	974	89
AY712948.1	West Nile virus isolate Mosquito v4369, complete genome	956	`.a..t..............`	974	89
AY646354.1	West Nile virus from USA, complete genome	956	`.a..t..............`	974	89
AY660002.1	West Nile virus isolate Mex03 from Mexico, complete genome	956	`.a..t..............`	974	89
AY795965.1	West Nile virus isolate ARC10, complete genome	956	`.a..t..............`	974	89
DQ066423.1	West Nile virus strain 385-99 isolate hamster passage strain 9317B, c	956	`.a..t..............`	974	89
DQ005530.1	West Nile virus isolate FDA-BSL5-2003, complete genome	956	`.a..t..............`	974	89
DQ080051.1	West Nile virus isolate A-AZ-03-1623 polyprotein precursor, gene, com	956	`.a..t..............`	974	89
DQ080052.1	West Nile virus isolate B-AZ-03-1681 polyprotein precursor, gene, com	956	`.a..t..............`	974	89
DQ080053.1	West Nile virus isolate C-AZ-03 03-1799 polyprotein precursor, gene,	956	`.a..t..............`	974	89
DQ080054.1	West Nile virus isolate E-CA-03 GRLA-1260 polyprotein precursor, gene	956	`.a..t..............`	974	89
DQ080055.1	West Nile virus isolate F-CA-03 IMPR 102 polyprotein precursor, gene,	956	`.a..t..............`	974	89
DQ080056.1	West Nile virus isolate G-CA-03 IMPR-1075 polyprotein precursor, gene	956	`.a..t..............`	974	89
DQ080057.1	West Nile virus isolate I-CA-03 Arcadia-S0331532 polyprotein precurso	956	`.a..t..............`	974	89
DQ080058.1	West Nile virus isolate J-CA-03 Arcadia-S0334814 polyprotein precurso	956	`.a..t..............`	974	89
DQ080059.1	West Nile virus isolate L-CA-04 SAC-04-7168 polyprotein precursor, ge	956	`.a..t..............`	974	89
DQ080060.1	West Nile virus isolate WNVCc polyprotein precursor, gene, complete c	927	`.a..t..............`	945	89
DQ080062.1	West Nile virus isolate TWN165 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080063.1	West Nile virus isolate TVP9223 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080064.1	West Nile virus isolate TVP9222 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080065.1	West Nile virus isolate TVP9221 polyprotein precursor, gene, complete	922	`.a..t..............`	940	89
DQ080066.1	West Nile virus isolate TVP9220 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080067.1	West Nile virus isolate TVP9219 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080068.1	West Nile virus isolate TVP9218 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080069.1	West Nile virus isolate TVP9117 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080070.1	West Nile virus isolate TVP9115 polyprotein precursor, gene, complete	928	`.a..t..............`	946	89
DQ080071.1	West Nile virus isolate FL234 polyprotein precursor, gene, complete c	927	`.a..t..............`	945	89
DQ080072.1	West Nile virus isolate FL232 polyprotein precursor, gene, complete c	927	`.a..t..............`	945	89
DQ116961.1	West Nile virus isolate goshawk-Hungary/04, complete genome	956	`.a..............t..`	974	89
DQ116961.1	West Nile virus isolate goshawk-Hungary/04, complete genome	10889	`_...t..........g.__`	10874	73
AY842931.3	West Nile virus strain 385-99, complete genome	956	`.a..t..............`	974	89
DQ164186.1	West Nile virus isolate NY 2002 Queens, complete genome	956	`.a..t..............`	974	89
DQ164187.1	West Nile virus isolate NY 2002 Broome, complete genome	956	`.a..t..............`	974	89
DQ164188.1	West Nile virus isolate NY 2003 Westchester, complete genome	956	`.a..t..............`	974	89
DQ164189.1	West Nile virus isolate NY 2003 Albany, complete genome	956	`.a..t..............`	974	89
DQ164190.1	West Nile virus isolate NY 2003 Suffolk, complete genome	956	`.a..t..............`	974	89
DQ164191.1	West Nile virus isolate NY 2003 Chautauqua, complete genome	956	`.a..t..............`	974	89
DQ164192.1	West Nile virus isolate NY 2003 Rockland, complete genome	956	`.a..t..............`	974	89
DQ164193.1	West Nile virus isolate NY 2002 Clinton, complete genome	956	`.a..t..............`	974	89
DQ164194.1	West Nile virus isolate NY 2001 Suffolk, complete genome	956	`.a..t..............`	974	89
DQ164195.1	West Nile virus isolate NY 2002 Nassau, complete genome	956	`.a..t..............`	974	89
DQ164196.1	West Nile virus isolate GA 2002 1, complete genome	956	`.a..t..............`	974	89
DQ164197.1	West Nile virus isolate GA 2002 2, complete genome	956	`.a..t..............`	974	89
DQ164198.1	West Nile virus isolate TX 2002 1, complete genome	956	`.a..t..............`	974	89
DQ164199.1	West Nile virus isolate TX 2003, complete genome	956	`.a..t..............`	974	89
DQ164200.1	West Nile virus isolate IN 2002, complete genome	956	`.a..t..............`	974	89
DQ164201.1	West Nile virus isolate AZ 2004, complete genome	956	`.a..t..............`	974	89
DQ164202.1	West Nile virus isolate OH 2002, complete genome	956	`.a..t..............`	974	89
DQ164203.1	West Nile virus isolate CO 2003 2, complete genome	956	`.a..t..............`	974	89
DQ164203.1	West Nile virus isolate CO 2003 2, complete genome	10866	`_...c..........g.__`	10851	73
DQ164204.1	West Nile virus isolate CO 2003 1, complete genome	956	`.a..t..............`	974	89
DQ164205.1	West Nile virus isolate TX 2002 2, complete genome	956	`.a..t..............`	974	89
DQ164206.1	West Nile virus isolate TX 2004 Harris 4, complete genome	956	`.a..t..............`	974	89
DQ176637.1	West Nile virus strain TX 2002-HC, complete genome	899	`.a..t..............`	917	89
AY848697.2	West Nile virus strain 385-99 isolate hamster passage strain TVP-9376	956	`.a..t..............`	974	89
AY848695.2	West Nile virus strain 385-99 isolate hamster passage strain 9317A, c	956	`.a..t..............`	974	89
AY848696.2	West Nile virus strain 385-99 isolate hamster passage strain 9317E, c	956	`.a..t..............`	974	89
DQ256376.1	West Nile virus strain 804994, complete genome	956	`.a..............t..`	974	89
DQ431693.1	West Nile virus isolate 03-20TX polyprotein precursor, gene, complete	860	`.a..t..............`	878	89
DQ431694.1	West Nile virus isolate 03-22TX polyprotein precursor, gene, complete	860	`.a..t..............`	878	89
DQ431695.1	West Nile virus isolate 03-82IL polyprotein precursor, gene, complete	860	`.a..t..............`	878	89
DQ431696.1	West Nile virus isolate 03-104WI polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431697.1	West Nile virus isolate 03-113FL polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431698.1	West Nile virus isolate 03-120FL polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431699.1	West Nile virus isolate 03-124FL polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431700.1	West Nile virus isolate 04-213CA polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431701.1	West Nile virus isolate 04-214CO polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431702.1	West Nile virus isolate 04-216CO polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431703.1	West Nile virus isolate 04-218CO polyprotein precursor, gene, complet	860	`.a..c..............`	878	89
DQ431704.1	West Nile virus isolate 04-219CO polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431705.1	West Nile virus isolate 04-233ND polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431706.1	West Nile virus isolate 04-236NM polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431707.1	West Nile virus isolate 04-237NM polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431708.1	West Nile virus isolate 04-238CA polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431709.1	West Nile virus isolate 04-240CA polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431710.1	West Nile virus isolate 04-244CA polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431711.1	West Nile virus isolate 04-251AZ polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ431712.1	West Nile virus isolate 04-252AZ polyprotein precursor, gene, complet	860	`.a..t..............`	878	89
DQ666448.1	West Nile virus isolate BSL5-2004, complete genome	956	`.a..t..............`	974	89
DQ666449.1	West Nile virus isolate GCTX1-2005, complete genome	956	`.a..t..............`	974	89
DQ666450.1	West Nile virus isolate GCTX2-2005, complete genome	956	`.a..t..............`	974	89
DQ666451.1	West Nile virus isolate BSL13-2005, complete genome	956	`.a..t..............`	974	89
DQ666452.1	West Nile virus isolate BSL2-2005, complete genome	956	`.a..t..............`	974	89
DQ176636.2	West Nile virus strain Madagascar-AnMg798, complete genome	955	`..........t.....t..`	973	89
DQ176636.2	West Nile virus strain Madagascar-AnMg798, complete genome	10800	`_...t..........g.__`	10785	73
DQ983578.1	West Nile virus strain FLO3-FL2-3, partial genome	936	`.a..t..............`	954	89
CS543188.1	Sequence 1 from Patent WO2007015783	956	`.a..t..............`	974	89
CS568914.1	Sequence 1 from Patent WO2006029300	956	`.a..t..............`	974	89
CS568916.1	Sequence 3 from Patent WO2006029300	956	`.a..t..............`	974	89
CS568917.1	Sequence 4 from Patent WO2006029300	956	`.a..t..............`	974	89
CS568918.1	Sequence 5 from Patent WO2006029300	956	`.a..t..............`	974	89
CS568919.1	Sequence 6 from Patent WO2006029300	956	`.a..t..............`	974	89
EF571854.1	West Nile virus strain 385-99, complete genome	956	`.a..t..............`	974	89
EF530047.1	West Nile virus strain 3356.2.1.1, complete genome	956	`.a..t..............`	974	89
EF657887.1	West Nile virus strain 3356K VP2, complete genome	956	`.a..t..............`	974	89
EU155484.1	West Nile virus strain OK03, complete genome	956	`.a..t..............`	974	89
FJ151394.1	West Nile virus strain NY99-crow-V76/1, complete genome	956	`.a..t..............`	974	89
FJ411043.1	West Nile virus isolate NY99iso-1, complete genome	956	`.a..t..............`	974	89
FJ483548.1	West Nile virus strain 15217, complete genome	956	`.a..c..............`	974	89
FJ483549.1	West Nile virus strain 15803, complete genome	956	`.a..c..............`	974	89
AJ965626.2	West Nile virus strain PT6.16 polyprotein, genomic RNA	931	`.a..c..............`	949	89
AJ965628.2	West Nile virus strain PT5.2 polyprotein, genomic RNA, complete genom	931	`.a..c..............`	949	89
GQ379156.1	West Nile virus strain FL2001 crow 67030, complete genome	956	`.a..t..............`	974	89
GQ379157.1	West Nile virus strain DB080718-14, complete genome	956	`.a..t..............`	974	89
GQ379158.1	West Nile virus strain ORCO0559-07, complete genome	956	`.a..t..............`	974	89
GQ379159.1	West Nile virus strain JPW080813-01, complete genome	956	`.a..t..............`	974	89
GQ379160.1	West Nile virus strain ArEq001, complete genome	956	`.a..t..............`	974	89
GQ379161.1	West Nile virus strain ArEq003, complete genome	956	`.a..t..............`	974	89
GU011992.2	West Nile virus strain Ita09, complete genome	956	`.a..c..............`	974	89
GU827998.1	West Nile virus isolate Bird114 polyprotein gene, complete cds	902	`.a..t..............`	920	89
GU827999.1	West Nile virus isolate Bird1576 polyprotein gene, complete cds	921	`.a..t..............`	939	89
GU828000.1	West Nile virus isolate Bird1175 polyprotein gene, complete cds	908	`.a..t..............`	926	89
GU828001.1	West Nile virus isolate v4380 polyprotein gene, complete cds	908	`.a..t..............`	926	89
GU828002.1	West Nile virus isolate v4095 polyprotein gene, complete cds	907	`.a..t..............`	925	89
GU828003.1	West Nile virus isolate Bird1881 polyprotein gene, complete cds	909	`.a..t..............`	927	89
GU828004.1	West Nile virus isolate Bird1519 polyprotein gene, complete cds	909	`.a..t..............`	927	89
HM488177.1	West Nile virus isolate WNV-1/US/BID-V4336/2002, complete genome	956	`.a..t..............`	974	89
HM488178.1	West Nile virus isolate WNV-1/US/BID-V4337/2002, complete genome	949	`.a..t..............`	967	89
HM488179.1	West Nile virus isolate WNV-1/US/BID-V4338/2002, complete genome	956	`.a..t..............`	974	89
HM488180.1	West Nile virus isolate WNV-1/US/BID-V4339/2002, complete genome	957	`.a..t..............`	975	89
HM488181.1	West Nile virus isolate WNV-1/US/BID-V4340/2002, complete genome	956	`.a..t..............`	974	89
HM488182.1	West Nile virus isolate WNV-1/US/BID-V4341/2002, complete genome	956	`.a..t..............`	974	89
HM488183.1	West Nile virus isolate WNV-1/US/BID-V4345/2002, complete genome	956	`.a..t..............`	974	89
HM488184.1	West Nile virus isolate WNV-1/US/BID-V4346/2002, complete genome	956	`.a..t..............`	974	89
HM488185.1	West Nile virus isolate WNV-1/US/BID-V4347/2003, complete genome	955	`.a..t..............`	973	89
HM488186.1	West Nile virus isolate WNV-1/US/BID-V4350/2003, complete genome	956	`.a..t..............`	974	89
HM488187.1	West Nile virus isolate WNV-1/US/BID-V4351/2003, complete genome	955	`.a..t..............`	973	89
HM488188.1	West Nile virus isolate WNV-1/US/BID-V4353/2004, complete genome	956	`.a..t..............`	974	89
HM488189.1	West Nile virus isolate WNV-1/US/BID-V4367/2004, complete genome	956	`.a..t..............`	974	89
HM488190.1	West Nile virus isolate WNV-1/US/BID-V4368/2004, complete genome	952	`.a..t..............`	970	89
HM488191.1	West Nile virus isolate WNV-1/US/BID-V4369/2004, complete genome	956	`.a..t..............`	974	89
HM488192.1	West Nile virus isolate WNV-1/US/BID-V4371/2005, complete genome	956	`.a..t..............`	974	89
HM488195.1	West Nile virus isolate WNV-1/US/BID-V4375/2005, complete genome	956	`.a..t..............`	974	89
HM488194.1	West Nile virus isolate WNV-1/US/BID-V4374/2005, complete genome	999	`.a..t..............`	1017	89
HM488196.1	West Nile virus isolate WNV-1/US/BID-V4376/2005, complete genome	956	`.a..t..............`	974	89
HM488197.1	West Nile virus isolate WNV-1/US/BID-V4377/2005, complete genome	955	`.a..t..............`	973	89
HM488198.1	West Nile virus isolate WNV-1/US/BID-V4378/2005, complete genome	952	`.a..t..............`	970	89
HM488199.1	West Nile virus isolate WNV-1/US/BID-V4090/2007, complete genome	956	`.a..t..............`	974	89
HM488200.1	West Nile virus isolate WNV-1/US/BID-V4092/2007, complete genome	955	`.a..t..............`	973	89
HM488201.1	West Nile virus isolate WNV-1/US/BID-V4093/2007, complete genome	1000	`.a..t..............`	1018	89
HM488202.1	West Nile virus isolate WNV-1/US/BID-V4094/2007, complete genome	956	`.a..t..............`	974	89
HM488203.1	West Nile virus isolate WNV-1/US/BID-V4096/2008, complete genome	956	`.a..t..............`	974	89
HM488204.1	West Nile virus isolate WNV-1/US/BID-V4098/2008, complete genome	956	`.a..t..............`	974	89
HM488205.1	West Nile virus isolate WNV-1/US/BID-V4099/2008, complete genome	956	`.a..t..............`	974	89
HM488206.1	West Nile virus isolate WNV-1/US/BID-V4100/2008, complete genome	956	`.a..t..............`	974	89
HM488207.1	West Nile virus isolate WNV-1/US/BID-V4101/2008, complete genome	956	`.a..t..............`	974	89
HM488208.1	West Nile virus isolate WNV-1/US/BID-V4204/2002, complete genome	982	`.a..t..............`	1000	89
HM488209.1	West Nile virus isolate WNV-1/US/BID-V4564/2003, complete genome	956	`.a..t..............`	974	89
HM488210.1	West Nile virus isolate WNV-1/US/BID-V4565/2003, complete genome	956	`.a..t..............`	974	89
HM488211.1	West Nile virus isolate WNV-1/US/BID-V4566/2003, complete genome	956	`.a..t..............`	974	89
HM488212.1	West Nile virus isolate WNV-1/US/BID-V4567/2003, complete genome	999	`.a..t..............`	1017	89
HM488213.1	West Nile virus isolate WNV-1/US/BID-V4571/2003, complete genome	956	`.a..t..............`	974	89
HM488214.1	West Nile virus isolate WNV-1/US/BID-V4572/2003, complete genome	956	`.a..t..............`	974	89
HM488215.1	West Nile virus isolate WNV-1/US/BID-V4573/2003, complete genome	956	`.a..t..............`	974	89
HM488216.1	West Nile virus isolate WNV-1/US/BID-V4574/2003, complete genome	956	`.a..t..............`	974	89
HM488217.1	West Nile virus isolate WNV-1/US/BID-V4581/2003, complete genome	956	`.a..t..............`	974	89
HM488218.1	West Nile virus isolate WNV-1/US/BID-V4583/2003, complete genome	1000	`.a..t..............`	1018	89
HM488219.1	West Nile virus isolate WNV-1/US/BID-V4585/2003, complete genome	998	`.a..t..............`	1016	89
HM488220.1	West Nile virus isolate WNV-1/US/BID-V4586/2003, complete genome	956	`.a..t..............`	974	89
HM488221.1	West Nile virus isolate WNV-1/US/BID-V4593/2003, complete genome	996	`.a..t..............`	1014	89
HM488222.1	West Nile virus isolate WNV-1/US/BID-V4599/2003, complete genome	956	`.a..t..............`	974	89
HM488223.1	West Nile virus isolate WNV-1/US/BID-V4603/2003, complete genome	954	`.a..t..............`	972	89
HM488224.1	West Nile virus isolate WNV-1/US/BID-V4604/2003, complete genome	956	`.a..t..............`	974	89
HM488225.1	West Nile virus isolate WNV-1/US/BID-V4605/2003, complete genome	955	`.a..t..............`	973	89
HM488226.1	West Nile virus isolate WNV-1/US/BID-V4607/2003, complete genome	956	`.a..t..............`	974	89
HM488227.1	West Nile virus isolate WNV-1/US/BID-V4608/2003, complete genome	990	`.a..t..............`	1008	89
HM488228.1	West Nile virus isolate WNV-1/US/BID-V4609/2003, complete genome	956	`.a..t..............`	974	89
HM488229.1	West Nile virus isolate WNV-1/US/BID-V4610/2003, complete genome	1000	`.a..t..............`	1018	89
HM488230.1	West Nile virus isolate WNV-1/US/BID-V4612/2003, complete genome	956	`.a..t..............`	974	89
HM488231.1	West Nile virus isolate WNV-1/US/BID-V4613/2003, complete genome	956	`.a..t..............`	974	89
HM488232.1	West Nile virus isolate WNV-1/US/BID-V4614/2003, complete genome	956	`.a..t..............`	974	89
HM488233.1	West Nile virus isolate WNV-1/US/BID-V4616/2003, complete genome	956	`.a..t..............`	974	89
HM488234.1	West Nile virus isolate WNV-1/US/BID-V4617/2003, complete genome	956	`.a..t..............`	974	89
HM488235.1	West Nile virus isolate WNV-1/US/BID-V4619/2003, complete genome	956	`.a..t..............`	974	89
HM488236.1	West Nile virus isolate WNV-1/US/BID-V4700/2003, complete genome	947	`.a..t..............`	965	89
HM488237.1	West Nile virus isolate WNV-1/US/BID-V4622/2008, complete genome	956	`.a..t..............`	974	89
HM488238.1	West Nile virus isolate WNV-1/US/BID-V4623/2008, complete genome	956	`.a..t..............`	974	89
HM488239.1	West Nile virus isolate WNV-1/US/BID-V4624/2008, complete genome	956	`.a..t..............`	974	89
HM488240.1	West Nile virus isolate WNV-1/US/BID-V4627/2008, complete genome	956	`.a..t..............`	974	89
HM488241.1	West Nile virus isolate WNV-1/US/BID-V4628/2008, complete genome	956	`.a..t..............`	974	89
HM488242.1	West Nile virus isolate WNV-1/US/BID-V4631/2008, complete genome	952	`.a..t..............`	970	89
HM488243.1	West Nile virus isolate WNV-1/US/BID-V4632/2008, complete genome	956	`.a..t..............`	974	89
HM488244.1	West Nile virus isolate WNV-1/US/BID-V4634/2008, complete genome	956	`.a..t..............`	974	89
HM488245.1	West Nile virus isolate WNV-1/US/BID-V4635/2008, complete genome	956	`.a..t..............`	974	89
HM488246.1	West Nile virus isolate WNV-1/US/BID-V4689/2001, complete genome	949	`.a..t..............`	967	89
HM488247.1	West Nile virus isolate WNV-1/US/BID-V4691/2001, complete genome	947	`.a..t..............`	965	89
HM488248.1	West Nile virus isolate WNV-1/US/BID-V4694/2001, complete genome	947	`.a..t..............`	965	89
HM488249.1	West Nile virus isolate WNV-1/US/BID-V4696/2001, complete genome	947	`.a..t..............`	965	89
HM488250.1	West Nile virus isolate WNV-1/US/BID-V4717/2003, complete genome	947	`.a..t..............`	965	89
HM488251.1	West Nile virus isolate WNV-1/US/BID-V4719/2003, complete genome	947	`.a..t..............`	965	89
HM488252.1	West Nile virus isolate WNV-1/US/BID-V4805/2005, complete genome	947	`.a..t..............`	965	89
HM488253.1	West Nile virus isolate WNV-1/US/BID-V4553/2006, complete genome	971	`.a..t..............`	989	89
HM488254.1	West Nile virus isolate WNV-1/US/BID-V4559/2007, complete genome	956	`.a..t..............`	974	89
HM756648.1	West Nile virus isolate WNV-1/US/BID-V4205/2002, complete genome	956	`.a..t..............`	974	89
HM756649.1	West Nile virus isolate WNV-1/US/BID-V4354/2006, complete genome	956	`.a..t..............`	974	89
HM756650.1	West Nile virus isolate WNV-1/US/BID-V4582/2003, complete genome	956	`.a..t..............`	974	89
HM756651.1	West Nile virus isolate WNV-1/US/BID-V4584/2003, complete genome	951	`.a..t..............`	969	89
HM756653.1	West Nile virus isolate WNV-1/US/BID-V4588/2003, complete genome	956	`.a..t..............`	974	89
HM756654.1	West Nile virus isolate WNV-1/US/BID-V4598/2003, complete genome	956	`.a..t..............`	974	89
HM756656.1	West Nile virus isolate WNV-1/US/BID-V4615/2003, complete genome	956	`.a..t..............`	974	89
HM756657.1	West Nile virus isolate WNV-1/US/BID-V4685/2003, complete genome	947	`.a..t..............`	965	89
HM756658.1	West Nile virus isolate WNV-1/US/BID-V4686/2003, complete genome	947	`.a..t..............`	965	89
HM756659.1	West Nile virus isolate WNV-1/US/BID-V4687/2003, complete genome	947	`.a..t..............`	965	89
HM756660.1	West Nile virus isolate WNV-1/US/BID-V4097/2008, complete genome	953	`.a..t..............`	971	89
HM756661.1	West Nile virus isolate WNV-1/US/BID-V4692/2001, complete genome	948	`.a..t..............`	966	89
HM756662.1	West Nile virus isolate WNV-1/US/BID-V4693/2001, complete genome	947	`.a..t..............`	965	89
HM756663.1	West Nile virus isolate WNV-1/US/BID-V4697/2001, complete genome	947	`.a..t..............`	965	89
HM756664.1	West Nile virus isolate WNV-1/US/BID-V4701/2002, complete genome	947	`.a..t..............`	965	89
HM756665.1	West Nile virus isolate WNV-1/US/BID-V4709/2002, complete genome	947	`.a..t..............`	965	89
HM756666.1	West Nile virus isolate WNV-1/US/BID-V4711/2003, complete genome	949	`.a..t..............`	967	89
HM756667.1	West Nile virus isolate WNV-1/US/BID-V4712/2003, complete genome	948	`.a..t..............`	966	89
HM756668.1	West Nile virus isolate WNV-1/US/BID-V4716/2003, complete genome	947	`.a..t..............`	965	89
HM756669.1	West Nile virus isolate WNV-1/US/BID-V4718/2003, complete genome	947	`.a..t..............`	965	89
HM756670.1	West Nile virus isolate WNV-1/US/BID-V4720/2003, complete genome	947	`.a..t..............`	965	89
HM756671.1	West Nile virus isolate WNV-1/US/BID-V4798/2004, complete genome	947	`.a..t..............`	965	89
HM756672.1	West Nile virus isolate WNV-1/US/BID-V4799/2004, complete genome	947	`.a..t..............`	965	89
HM756673.1	West Nile virus isolate WNV-1/US/BID-V4801/2004, complete genome	947	`.a..t..............`	965	89
HM756675.1	West Nile virus isolate WNV-1/US/BID-V4806/2005, complete genome	947	`.a..t..............`	965	89
HM756676.1	West Nile virus isolate WNV-1/US/BID-V4349/2003, complete genome	955	`.a..t..............`	973	89
HM756677.1	West Nile virus isolate WNV-1/US/BID-V4530/2005, complete genome	956	`.a..t..............`	974	89
HM756678.1	West Nile virus isolate WNV-1/US/BID-V4095/2007, complete genome	956	`.a..t..............`	974	89
HM488114.1	West Nile virus isolate WNV-1/US/BID-V4102/2002, complete genome	956	`.a..t..............`	974	89
HM488115.1	West Nile virus isolate WNV-1/US/BID-V4103/2005, complete genome	956	`.a..t..............`	974	89
HM488116.1	West Nile virus isolate WNV-1/US/BID-V4104/2005, complete genome	990	`.a..t..............`	1008	89
HM488117.1	West Nile virus isolate WNV-1/US/BID-V4105/2005, complete genome	956	`.a..t..............`	974	89
HM488118.1	West Nile virus isolate WNV-1/US/BID-V4107/2005, complete genome	956	`.a..t..............`	974	89
HM488119.1	West Nile virus isolate WNV-1/US/BID-V4108/2005, complete genome	956	`.a..t..............`	974	89
HM488120.1	West Nile virus isolate WNV-1/US/BID-V4109/2005, complete genome	956	`.a..t..............`	974	89
HM488121.1	West Nile virus isolate WNV-1/US/BID-V4110/2005, complete genome	956	`.a..t..............`	974	89
HM488125.1	West Nile virus isolate WNV-1/US/BID-V4186/1999, complete genome	955	`.a..t..............`	973	89
HM488126.1	West Nile virus isolate WNV-1/US/BID-V4187/1999, complete genome	956	`.a..t..............`	974	89
HM488127.1	West Nile virus isolate WNV-1/US/BID-V4188/1999, complete genome	960	`.a..t..............`	978	89
HM488128.1	West Nile virus isolate WNV-1/US/BID-V4189/1999, complete genome	951	`.a..t..............`	969	89
HM488129.1	West Nile virus isolate WNV-1/US/BID-V4191/2000, complete genome	956	`.a..t..............`	974	89
HM488130.1	West Nile virus isolate WNV-1/US/BID-V4192/2000, complete genome	956	`.a..t..............`	974	89
HM488131.1	West Nile virus isolate WNV-1/US/BID-V4193/2000, complete genome	955	`.a..t..............`	973	89
HM488132.1	West Nile virus isolate WNV-1/US/BID-V4194/2000, complete genome	956	`.a..t..............`	974	89
HM488133.1	West Nile virus isolate WNV-1/US/BID-V4195/2001, complete genome	956	`.a..t..............`	974	89
HM488134.1	West Nile virus isolate WNV-1/US/BID-V4198/2001, complete genome	956	`.a..t..............`	974	89
HM488135.1	West Nile virus isolate WNV-1/US/BID-V4199/2001, complete genome	956	`.a..t..............`	974	89
HM488136.1	West Nile virus isolate WNV-1/US/BID-V4200/2001, complete genome	956	`.a..t..............`	974	89
HM488137.1	West Nile virus isolate WNV-1/US/BID-V4202/2002, complete genome	956	`.a..t..............`	974	89
HM488138.1	West Nile virus isolate WNV-1/US/BID-V4207/2003, complete genome	956	`.a..t..............`	974	89
HM488139.1	West Nile virus isolate WNV-1/US/BID-V4208/2003, complete genome	953	`.a..t..............`	971	89
HM488140.1	West Nile virus isolate WNV-1/US/BID-V4210/2003, complete genome	956	`.a..t..............`	974	89
HM488141.1	West Nile virus isolate WNV-1/US/BID-V4212/2003, complete genome	955	`.a..t..............`	973	89
HM488142.1	West Nile virus isolate WNV-1/US/BID-V4214/2004, complete genome	953	`.a..t..............`	971	89
HM488143.1	West Nile virus isolate WNV-1/US/BID-V4215/2004, complete genome	956	`.a..t..............`	974	89
HM488144.1	West Nile virus isolate WNV-1/US/BID-V4216/2004, complete genome	956	`.a..t..............`	974	89
HM488145.1	West Nile virus isolate WNV-1/US/BID-V4217/2004, complete genome	956	`.a..t..............`	974	89
HM488146.1	West Nile virus isolate WNV-1/US/BID-V4218/2004, complete genome	956	`.a..t..............`	974	89
HM488147.1	West Nile virus isolate WNV-1/US/BID-V4219/2004, complete genome	956	`.a..t..............`	974	89
HM488148.1	West Nile virus isolate WNV-1/US/BID-V4220/2004, complete genome	956	`.a..t..............`	974	89
HM488149.1	West Nile virus isolate WNV-1/US/BID-V4223/2005, complete genome	956	`.a..t..............`	974	89
HM488150.1	West Nile virus isolate WNV-1/US/BID-V4224/2005, complete genome	956	`.a..t..............`	974	89
HM488151.1	West Nile virus isolate WNV-1/US/BID-V4225/2005, complete genome	956	`.a..t..............`	974	89
HM488152.1	West Nile virus isolate WNV-1/US/BID-V4226/2005, complete genome	956	`.a..t..............`	974	89
HM488153.1	West Nile virus isolate WNV-1/US/BID-V4227/2005, complete genome	955	`.a..t..............`	973	89
HM488154.1	West Nile virus isolate WNV-1/US/BID-V4228/2005, complete genome	960	`.a..t..............`	978	89
HM488155.1	West Nile virus isolate WNV-1/US/BID-V4229/2006, complete genome	956	`.a..t..............`	974	89
HM488156.1	West Nile virus isolate WNV-1/US/BID-V4230/2006, complete genome	956	`.a..t..............`	974	89
HM488157.1	West Nile virus isolate WNV-1/US/BID-V4231/2006, complete genome	956	`.a..t..............`	974	89
HM488158.1	West Nile virus isolate WNV-1/US/BID-V4232/2006, complete genome	955	`.a..t..............`	973	89
HM488159.1	West Nile virus isolate WNV-1/US/BID-V4233/2006, complete genome	956	`.a..t..............`	974	89
HM488160.1	West Nile virus isolate WNV-1/US/BID-V4355/2006, complete genome	954	`.a..t..............`	972	89
HM488161.1	West Nile virus isolate WNV-1/US/BID-V4356/2007, complete genome	956	`.a..t..............`	974	89
HM488162.1	West Nile virus isolate WNV-1/US/BID-V4357/2007, complete genome	949	`.a..t..............`	967	89
HM488163.1	West Nile virus isolate WNV-1/US/BID-V4359/2007, complete genome	956	`.a..t..............`	974	89
HM488164.1	West Nile virus isolate WNV-1/US/BID-V4360/2007, complete genome	956	`.a..t..............`	974	89
HM488165.1	West Nile virus isolate WNV-1/US/BID-V4361/2007, complete genome	956	`.a..t..............`	974	89
HM488166.1	West Nile virus isolate WNV-1/US/BID-V4362/2008, complete genome	971	`.a..t..............`	989	89
HM488167.1	West Nile virus isolate WNV-1/US/BID-V4363/2008, complete genome	956	`.a..t..............`	974	89
HM488168.1	West Nile virus isolate WNV-1/US/BID-V4364/2008, complete genome	956	`.a..t..............`	974	89
HM488169.1	West Nile virus isolate WNV-1/US/BID-V4365/2008, complete genome	956	`.a..t..............`	974	89
HM488170.1	West Nile virus isolate WNV-1/US/BID-V4366/2008, complete genome	956	`.a..t..............`	974	89
HM488171.1	West Nile virus isolate WNV-1/US/BID-V4560/2003, complete genome	957	`.a..t..............`	975	89
HM488172.1	West Nile virus isolate WNV-1/US/BID-V4561/2003, complete genome	998	`.a..t..............`	1016	89
HM488173.1	West Nile virus isolate WNV-1/US/BID-V4562/2003, complete genome	1001	`.a..t..............`	1019	89
HM488174.1	West Nile virus isolate WNV-1/US/BID-V4563/2003, complete genome	998	`.a..t..............`	1016	89
HM488175.1	West Nile virus isolate WNV-1/US/BID-V4569/2003, complete genome	999	`.a..t..............`	1017	89
HM488176.1	West Nile virus isolate WNV-1/US/BID-V4575/2003, complete genome	1000	`.a..t..............`	1018	89
HM488122.1	West Nile virus isolate WNV-1/CTFS/BID-V4111/2006, complete genome	952	`.a..t..............`	970	89
HM488123.1	West Nile virus isolate WNV-1/CTFS/BID-V4112/2006, complete genome	955	`.a..t..............`	973	89
HM488124.1	West Nile virus isolate WNV-1/CTFS/BID-V4113/2006, complete genome	956	`.a..t..............`	974	89
HQ596519.1	West Nile virus strain New York 99 isolate 4132, complete genome	956	`.a..t..............`	974	89
HQ671696.1	West Nile virus isolate WNV-1/US/BID-V4196/2001, complete genome	956	`.a..t..............`	974	89
HQ671697.1	West Nile virus isolate WNV-1/US/BID-V4197/2001, complete genome	956	`.a..t..............`	974	89
HQ671698.1	West Nile virus isolate WNV-1/US/BID-V4203/2002, complete genome	956	`.a..t..............`	974	89
HQ671699.1	West Nile virus isolate WNV-1/US/BID-V4206/2002, complete genome	988	`.a..t..............`	1006	89
HQ671700.1	West Nile virus isolate WNV-1/US/BID-V4576/2003, complete genome	999	`.a..t..............`	1017	89
HQ671701.1	West Nile virus isolate WNV-1/US/BID-V4590/2003, complete genome	951	`.a..t..............`	969	89
HQ671702.1	West Nile virus isolate WNV-1/US/BID-V4595/2003, complete genome	996	`.a..t..............`	1014	89
HQ671703.1	West Nile virus isolate WNV-1/US/BID-V4611/2003, complete genome	947	`.a..t..............`	965	89
HQ671704.1	West Nile virus isolate WNV-1/US/BID-V4618/2003, complete genome	956	`.a..t..............`	974	89
HQ671705.1	West Nile virus isolate WNV-1/US/BID-V4620/2003, complete genome	947	`.a..t..............`	965	89
HQ671706.1	West Nile virus isolate WNV-1/US/BID-V4898/1999, complete genome	948	`.a..t..............`	966	89
HQ671707.1	West Nile virus isolate WNV-1/US/BID-V4899/1999, complete genome	947	`.a..t..............`	965	89
HQ671708.1	West Nile virus isolate WNV-1/US/BID-V4900/2000, complete genome	947	`.a..t..............`	965	89
HQ671709.1	West Nile virus isolate WNV-1/US/BID-V4901/2000, complete genome	947	`.a..t..............`	965	89
HQ671710.1	West Nile virus isolate WNV-1/US/BID-V4902/2000, complete genome	947	`.a..t..............`	965	89
HQ671711.1	West Nile virus isolate WNV-1/US/BID-V4903/2000, complete genome	947	`.a..t..............`	965	89
HQ671712.1	West Nile virus isolate WNV-1/US/BID-V4904/2000, complete genome	947	`.a..t..............`	965	89
HQ671713.1	West Nile virus isolate WNV-1/US/BID-V4905/2001, complete genome	947	`.a..t..............`	965	89
HQ671714.1	West Nile virus isolate WNV-1/US/BID-V4906/2001, complete genome	947	`.a..t..............`	965	89
HQ671715.1	West Nile virus isolate WNV-1/US/BID-V4908/2001, complete genome	947	`.a..t..............`	965	89
HQ671716.1	West Nile virus isolate WNV-1/US/BID-V4909/2001, complete genome	947	`.a..t..............`	965	89
HQ671717.1	West Nile virus isolate WNV-1/US/BID-V4910/2001, complete genome	948	`.a..t..............`	966	89
HQ671718.1	West Nile virus isolate WNV-1/US/BID-V4911/2001, complete genome	947	`.a..t..............`	965	89
HQ671719.1	West Nile virus isolate WNV-1/US/BID-V4912/2001, complete genome	947	`.a..t..............`	965	89
HQ671720.1	West Nile virus isolate WNV-1/US/BID-V4913/2002, complete genome	947	`.a..t..............`	965	89
HQ671721.1	West Nile virus isolate WNV-1/US/BID-V4625/2008, complete genome	956	`.a..t..............`	974	89
HQ671722.1	West Nile virus isolate WNV-1/US/BID-V4704/2002, complete genome	947	`.a..t..............`	965	89
HQ671723.1	West Nile virus isolate WNV-1/US/BID-V4715/2003, complete genome	947	`.a..t..............`	965	89
HQ671724.1	West Nile virus isolate WNV-1/US/BID-V4883/2005, complete genome	947	`.a..t..............`	965	89
HQ671725.1	West Nile virus isolate WNV-1/US/BID-V4885/2005, complete genome	947	`.a..t..............`	965	89
HQ671726.1	West Nile virus isolate WNV-1/US/BID-V4887/2005, complete genome	947	`.a..t..............`	965	89
HQ671727.1	West Nile virus isolate WNV-1/US/BID-V4889/2006, complete genome	887	`.a..t..............`	905	89
HQ671728.1	West Nile virus isolate WNV-1/US/BID-V4891/2006, complete genome	947	`.a..t..............`	965	89
HQ671729.1	West Nile virus isolate WNV-1/US/BID-V4892/2006, complete genome	947	`.a..t..............`	965	89
HQ671730.1	West Nile virus isolate WNV-1/US/BID-V4897/2007, complete genome	947	`.a..t..............`	965	89
HQ705659.1	West Nile virus isolate WNV-1/US/BID-V4209/2003, complete genome	867	`.a..t..............`	885	89
HQ705660.1	West Nile virus isolate WNV-1/US/BID-V4714/2003, complete genome	946	`.a..t..............`	964	89
HQ705669.1	West Nile virus isolate WNV-1/US/BID-V4342/2002, complete genome	956	`.a..t..............`	974	89
HQ671668.1	West Nile virus isolate WNV-1/Mus/BID-V4728/spleen, complete genome	956	`.a..t..............`	974	89
HQ671669.1	West Nile virus isolate WNV-1/Mus/BID-V4730/spleen, complete genome	998	`.a..t..............`	1016	89
HQ671670.1	West Nile virus isolate WNV-1/Mus/BID-V4731/spleen, complete genome	1000	`.a..t..............`	1018	89
HQ671671.1	West Nile virus isolate WNV-1/Mus/BID-V4920/spleen, complete genome	948	`.a..t..............`	966	89
HQ671672.1	West Nile virus isolate WNV-1/Mus/BID-V4921/spleen, complete genome	947	`.a..t..............`	965	89
HQ671673.1	West Nile virus isolate WNV-1/Mus/BID-V4924/spleen, complete genome	948	`.a..t..............`	966	89
HQ671674.1	West Nile virus isolate WNV-1/Mus/BID-V4925/spleen, complete genome	947	`.a..t..............`	965	89
HQ671675.1	West Nile virus isolate WNV-1/Mus/BID-V4926/spleen, complete genome	947	`.a..t..............`	965	89
HQ671676.1	West Nile virus isolate WNV-1/Mus/BID-V4937/spleen, complete genome	946	`.a..t..............`	964	89
HQ671677.1	West Nile virus isolate WNV-1/Mus/BID-V4938/spleen, complete genome	955	`.a..t..............`	973	89
HQ671678.1	West Nile virus isolate WNV-1/Mus/BID-V4940/spleen, complete genome	957	`.a..t..............`	975	89
HQ671679.1	West Nile virus isolate WNV-1/Mus/BID-V4969/serum, complete genome	923	`.a..t..............`	941	89
HQ671680.1	West Nile virus isolate WNV-1/Mus/BID-V4981/serum, complete genome	923	`.a..t..............`	941	89
HQ671681.1	West Nile virus isolate WNV-1/Mus/BID-V4985/spleen, complete genome	946	`.a..t..............`	964	89
HQ671682.1	West Nile virus isolate WNV-1/Mus/BID-V4986/spleen, complete genome	938	`.a..t..............`	956	89
HQ671683.1	West Nile virus isolate WNV-1/Mus/BID-V5006/brain, complete genome	923	`.a..t..............`	941	89
HQ671684.1	West Nile virus isolate WNV-1/Mus/BID-V5007/brain, complete genome	923	`.a..t..............`	941	89
HQ671685.1	West Nile virus isolate WNV-1/Mus/BID-V5008/brain, complete genome	923	`.a..t..............`	941	89
HQ671686.1	West Nile virus isolate WNV-1/Mus/BID-V5017/brain, complete genome	923	`.a..t..............`	941	89
HQ671687.1	West Nile virus isolate WNV-1/Culex/BID-V4161/legs, complete genome	957	`.a..t..............`	975	89
HQ671688.1	West Nile virus isolate WNV-1/Culex/BID-V4165/legs, complete genome	955	`.a..t..............`	973	89
HQ671689.1	West Nile virus isolate WNV-1/Culex/BID-V4174/legs, complete genome	955	`.a..t..............`	973	89
HQ671690.1	West Nile virus isolate WNV-1/Culex/BID-V4180/midgut, complete genome	940	`.a..t..............`	958	89
HQ671691.1	West Nile virus isolate WNV-1/Gallus/BID-V4958/kidney, complete genom	976	`.a..t..............`	994	89
HQ671692.1	West Nile virus isolate WNV-1/Gallus/BID-V4959/kidney, complete genom	959	`.a..t..............`	977	89
HQ671693.1	West Nile virus isolate WNV-1/Gallus/BID-V4961/kidney, complete genom	948	`.a..t..............`	966	89
HQ671694.1	West Nile virus isolate WNV-1/Gallus/BID-V4963/kidney, complete genom	947	`.a..t..............`	965	89
HQ671695.1	West Nile virus isolate WNV-1/Gallus/BID-V5112/skin, complete genome	923	`.a..t..............`	941	89
HQ671731.1	West Nile virus isolate WNV-1/Culex/BID-V4171/midgut, complete genome	956	`.a..t..............`	974	89
HQ671732.1	West Nile virus isolate WNV-1/Mus/BID-V5000/brain, complete genome	930	`.a..t..............`	948	89
HQ671733.1	West Nile virus isolate WNV-1/Mus/BID-V5004/brain, complete genome	923	`.a..t..............`	941	89
HQ705663.1	West Nile virus isolate WNV-1/Mus/BID-V4936/spleen, complete genome	947	`.a..t..............`	965	89
HQ705670.1	West Nile virus isolate WNV-1/Culex/BID-V4163/legs, complete genome	956	`.a..t..............`	974	89
HQ705671.1	West Nile virus isolate WNV-1/Culex/BID-V4166/midgut, complete genome	956	`.a..t..............`	974	89
HQ705672.1	West Nile virus isolate WNV-1/Culex/BID-V4168/legs, complete genome	956	`.a..t..............`	974	89
HQ705673.1	West Nile virus isolate WNV-1/Culex/BID-V4169/midgut, complete genome	956	`.a..t..............`	974	89
HQ705674.1	West Nile virus isolate WNV-1/Culex/BID-V4173/midgut, complete genome	956	`.a..t..............`	974	89
HQ705675.1	West Nile virus isolate WNV-1/Culex/BID-V4184/legs, complete genome	956	`.a..t..............`	974	89
HQ705676.1	West Nile virus isolate WNV-1/Mus/BID-V4971/serum, complete genome	922	`.a..t..............`	940	89
HQ705677.1	West Nile virus isolate WNV-1/Gallus/BID-V4960/kidney, complete genom	947	`.a..t..............`	965	89
HQ705678.1	West Nile virus isolate WNV-1/Gallus/BID-V4962/kidney, complete genom	948	`.a..t..............`	966	89
HQ891009.1	West Nile virus isolate WNV-1/Mus/BID-V4980/serum, complete genome	923	`.a..t..............`	941	89
HQ891010.1	West Nile virus isolate WNV-1/Mus/BID-V4987/spleen, complete genome	923	`.a..t..............`	941	89
HQ891011.1	West Nile virus isolate WNV-1/Mus/BID-V4993/brain, complete genome	923	`.a..t..............`	941	89
HQ891012.1	West Nile virus isolate WNV-1/Mus/BID-V5118/serum, complete genome	923	`.a..t..............`	941	89
HQ891013.1	West Nile virus isolate WNV-1/Mus/BID-V5122/serum, complete genome	923	`.a..t..............`	941	89
JF357958.1	West Nile virus isolate WNV-1/Mus/BID-V4997/brain, complete genome	952	`.a..t..............`	970	89
JF357959.1	West Nile virus isolate WNV-1/Mus/BID-V4999/brain, complete genome	956	`.a..t..............`	974	89
JF357960.1	West Nile virus isolate WNV-1/Gallus/BID-V5109/skin, complete genome	956	`.a..t..............`	974	89
HM147823.1	West Nile virus from Madagascar, complete genome	956	`.a...........t.....`	974	89
JF488086.1	West Nile virus isolate WNV-1/US/BID-V5176/2004, complete genome	956	`.a..t..............`	974	89
JF488087.1	West Nile virus isolate WNV-1/US/BID-V5177/2004, complete genome	956	`.a..t..............`	974	89
JF488088.1	West Nile virus isolate WNV-1/US/BID-V5178/2004, complete genome	956	`.a..t..............`	974	89
JF488089.1	West Nile virus isolate WNV-1/US/BID-V5179/2004, complete genome	956	`.a..t..............`	974	89
JF488090.1	West Nile virus isolate WNV-1/US/BID-V5180/2004, complete genome	969	`.a..t..............`	987	89
JF488091.1	West Nile virus isolate WNV-1/US/BID-V5181/2004, complete genome	956	`.a..t..............`	974	89
JF488092.1	West Nile virus isolate WNV-1/US/BID-V5182/2004, complete genome	956	`.a..g..............`	974	89
JF488093.1	West Nile virus isolate WNV-1/US/BID-V5188/2005, complete genome	956	`.a..t..............`	974	89
JF488094.1	West Nile virus isolate WNV-1/US/BID-V5150/2004, complete genome	956	`.a..t..............`	974	89
JF488095.1	West Nile virus isolate WNV-1/US/BID-V5157/2009, complete genome	956	`.a..t..............`	974	89
JF488096.1	West Nile virus isolate WNV-1/US/BID-V5159/2009, complete genome	956	`.a..t..............`	974	89
JF488097.1	West Nile virus isolate WNV-1/US/BID-V5148/2007, complete genome	956	`.a..t..............`	974	89
JF730040.1	West Nile virus isolate WNV-1/Mus/BID-V4982/serum, complete genome	923	`.a..t..............`	941	89
JF730042.1	West Nile virus isolate WNV-1/US/BID-V5147/2007, complete genome	956	`.a..t..............`	974	89
JF730043.1	West Nile virus isolate WNV-1/US/BID-V5170/2002, complete genome	956	`.a..t..............`	974	89
JF784158.1	West Nile virus isolate WNV-1/Mus/BID-V4974/serum, complete genome	956	`.a..t..............`	974	89
HQ537483.1	West Nile virus isolate Nea Santa-Greece-2010, complete genome	956	`.a..............t..`	974	89
HQ537483.1	West Nile virus isolate Nea Santa-Greece-2010, complete genome	10889	`_...t..........g.__`	10874	73
JF730041.1	West Nile virus isolate WNV-1/Mus/BID-V4729/spleen, complete genome	956	`.a..t..............`	974	89
JF899528.1	West Nile virus isolate WNV-1/US/BID-V4800/2004, complete genome	947	`.a..t..............`	965	89
JF899529.1	West Nile virus isolate WNV-1/US/BID-V4808/2005, complete genome	947	`.a..t..............`	965	89
JF899530.1	West Nile virus isolate WNV-1/Mus/BID-V4923/spleen, complete genome	947	`.a..t..............`	965	89
JF899531.1	West Nile virus isolate WNV-1/Mus/BID-V4979/serum, complete genome	957	`.a..t..............`	975	89
JF899532.1	West Nile virus isolate WNV-1/Mus/BID-V4992/brain, complete genome	956	`.a..t..............`	974	89
JF899533.1	West Nile virus isolate WNV-1/Mus/BID-V4996/brain, complete genome	965	`.a..t..............`	983	89
JF899534.1	West Nile virus isolate WNV-1/Mus/BID-V5002/brain, complete genome	956	`.a..t..............`	974	89
JF899535.1	West Nile virus isolate WNV-1/Mus/BID-V5142/brain, complete genome	923	`.a..t..............`	941	89
JF899536.1	West Nile virus isolate WNV-1/Mus/BID-V5145/brain, complete genome	935	`.a..t..............`	953	89
JF899537.1	West Nile virus isolate WNV-1/Mus/BID-V5146/brain, complete genome	956	`.a..t..............`	974	89
JF920306.1	West Nile virus isolate WNV-1/US/BID-V4597/2003, complete genome	990	`.a..t..............`	1008	89
JF920307.1	West Nile virus isolate WNV-1/US/BID-V4907/2001, complete genome	947	`.a..t..............`	965	89
JF920728.1	West Nile virus isolate WNV-1/US/BID-V4568/2003, complete genome	956	`.a..t..............`	974	89
JF920730.1	West Nile virus isolate WNV-1/US/BID-V5197/2006, complete genome	955	`.a..t..............`	973	89
JF920731.1	West Nile virus isolate WNV-1/US/BID-V5201/2006, complete genome	955	`.a..t..............`	973	89
JF920733.1	West Nile virus isolate WNV-1/US/BID-V5203/2006, complete genome	956	`.a..t..............`	974	89
JF920734.1	West Nile virus isolate WNV-1/US/BID-V5204/2006, complete genome	956	`.a..t..............`	974	89
JF920735.1	West Nile virus isolate WNV-1/US/BID-V5205/2006, complete genome	955	`.a..t..............`	973	89
JF920740.1	West Nile virus isolate WNV-1/US/BID-V5210/2007, complete genome	956	`.a..t..............`	974	89
JF920741.1	West Nile virus isolate WNV-1/US/BID-V5212/2007, complete genome	956	`.a..t..............`	974	89
JF920742.1	West Nile virus isolate WNV-1/US/BID-V5213/2007, complete genome	956	`.a..t..............`	974	89
JF920743.1	West Nile virus isolate WNV-1/US/BID-V5214/2007, complete genome	956	`.a..t..............`	974	89
JF920744.1	West Nile virus isolate WNV-1/US/BID-V5215/2007, complete genome	956	`.a..t..............`	974	89
JF920745.1	West Nile virus isolate WNV-1/US/BID-V5216/2007, complete genome	956	`.a..t..............`	974	89
JF920746.1	West Nile virus isolate WNV-1/US/BID-V5217/2007, complete genome	956	`.a..t..............`	974	89
JF920747.1	West Nile virus isolate WNV-1/US/BID-V5218/2008, complete genome	956	`.a..t..............`	974	89
JF920748.1	West Nile virus isolate WNV-1/US/BID-V5219/2008, complete genome	956	`.a..t..............`	974	89
JF920750.1	West Nile virus isolate WNV-1/US/BID-V5222/2008, complete genome	956	`.a..t..............`	974	89
JF920751.1	West Nile virus isolate WNV-1/US/BID-V5223/2008, complete genome	956	`.a..t..............`	974	89
JF920752.1	West Nile virus isolate WNV-1/US/BID-V5224/2008, complete genome	956	`.a..t..............`	974	89
JF920753.1	West Nile virus isolate WNV-1/US/BID-V5225/2008, complete genome	956	`.a..t..............`	974	89
JF920754.1	West Nile virus isolate WNV-1/US/BID-V5226/2008, complete genome	956	`.a..t..............`	974	89
JF920755.1	West Nile virus isolate WNV-1/US/BID-V5227/2008, complete genome	956	`.a..t..............`	974	89
JF920756.1	West Nile virus isolate WNV-1/US/BID-V5229/2008, complete genome	956	`.a..t..............`	974	89
JF920757.1	West Nile virus isolate WNV-1/US/BID-V5230/2008, complete genome	956	`.a..t..............`	974	89
JF920758.1	West Nile virus isolate WNV-1/US/BID-V5233/2009, complete genome	956	`.a..t..............`	974	89
JF920759.1	West Nile virus isolate WNV-1/US/BID-V5234/2009, complete genome	950	`.a..t..............`	968	89
HQ671742.1	West Nile virus isolate WNV-1/US/BID-V4343/2002, complete genome	956	`.a..t..............`	974	89
JF972636.1	West Nile virus isolate WNV-1/US/BID-V5228/2008, complete genome	956	`.a..t..............`	974	89
DQ211652.1	West Nile virus strain NY99, complete genome	956	`.a..t..............`	974	89
AY765264.1	West Nile virus strain Rabensburg isolate 97-103, complete genome	956	`.a..c...........t..`	974	84
DQ080061.1	West Nile virus isolate TWN496 polyprotein precursor, gene, complete	927	`.a..t...........t..`	945	84
JF920729.1	West Nile virus isolate WNV-1/US/BID-V5196/2006, complete genome	956	`.a..t..t...........`	974	84
JF920732.1	West Nile virus isolate WNV-1/US/BID-V5202/2006, complete genome	956	`.a..t..t...........`	974	84
JF920736.1	West Nile virus isolate WNV-1/US/BID-V5206/2006, complete genome	956	`.a..t..t...........`	974	84
JF920737.1	West Nile virus isolate WNV-1/US/BID-V5207/2006, complete genome	956	`.a..t..t...........`	974	84
JF920738.1	West Nile virus isolate WNV-1/US/BID-V5208/2007, complete genome	955	`.a..t..t...........`	973	84
JF920739.1	West Nile virus isolate WNV-1/US/BID-V5209/2007, complete genome	956	`.a..t..t...........`	974	84
JF920749.1	West Nile virus isolate WNV-1/US/BID-V5220/2008, complete genome	956	`.a..t..t...........`	974	84
EF429198.1	West Nile virus SA93/01, complete genome	10889	`_...t..........g.__`	10874	73
FJ425721.1	West Nile virus isolate Reb_VLG_07_H polyprotein gene, complete cds	10856	`_...t..........g.__`	10841	73
HM147822.1	West Nile virus from South Africa, complete genome	10904	`_...t..........g.__`	10889	73

VIRsiRNAdb

Database of Viral siRNA / shRNA